species:   Drmel
pid:       MI0017742
parent:    dme-mir-4956
paralog:   
locus:     NC_004354.4:7085737-7085853
matures:   ['CGAUGGCCAGCAACAACUCGCU', 'CGGAUUGUCGCUGGGCAGCGGU']
srr:       SRR11906543
genome:    /Users/jax/+Genomes/Animal_genomes/Drmel.GCF_000001215.4_Release_6_plus_ISO1_MT_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Drmel.SRR11906543.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Drmel.SRR11906543.cram NC_004354.4:7085737-7085853

0 out of bounds
6 alignments
6 proper strand
4 stranded perfect matches

                           ************************          ************************                                
AGGGGGCGGCAACAUGUGCCACCUGCCGCCGAUGGCCAGCAACAACUCGCUGAAUAAUCUCUGCGGAUUGUCGCUGGGCAGCGGUGGUAGUGAUGAUCUCAUGAACGAUCCUCGGGC
.(((((((....((((...((((((((((((.((.(((((.((((.((((.((......)).)))).)))).))))).)).))))))))).).))....))))..)).)))))....
-----------------------------CGAUGGCCAGCAACAACUCGCU------------------------------------------------------------------ l=22 a=3 c
---------------------------------------------------------------CGGAUUGUCGCUGGGCAGCGGU-------------------------------- l=22 a=1 c*
-----------------------------CGAUGGCCAGCAACAACUCGCU------------------------------------------------------------------ l=22 a=3 ma
---------------------------------------------------------------CGGAUUGUCGCUGGGCAGCGGU-------------------------------- l=22 a=1 ma*

---------------------------------------------------------------CGGAUUGUCGCUGGGCAGCGGU-------------------------------- l=22 a=1 (c*,ma*)
------------------------------GAUGGCCgGCAACAACUCGCU------------------------------------------------------------------ l=21 a=1 
-----------------------------CGAUGGCCAGCAACAACUCGCU------------------------------------------------------------------ l=22 a=3 (c,ma)
-----------------------------CGAUGGCCAGCAACAACUCGCUu----------------------------------------------------------------- l=23 a=1 

mb-01111
ax-1111011
ku-01
ss-111111111111
fn-011
